畜牧与饲料科学 ›› 2009, Vol. 30 ›› Issue (10): 20-20.doi: 10.12160/j.issn.1672-5190.2009.10.008

• 基础科学 • 上一篇    下一篇

IBRV内蒙古分离株NM06gE基因的克隆与序列分析

白春艳[1] 郭日东[2] 关平原[1] 乌日罕[3] 特木尔巴根[3] 马立峰[3] 菊花[3]   

  1. [1]内蒙古农业大学动物科学与医学学院,内蒙古呼和浩特010018 [2]内蒙古伊利实业股份有限公司原奶事业部,内蒙古呼和浩特010080 [3]内蒙古动物疫病预防与控制中心,内蒙古呼和浩特010020
  • 出版日期:2009-10-20 发布日期:2009-10-20
  • 通讯作者: 白春艳
  • 作者简介:白春艳(1985-),女,硕士,主要研究方向为动物传染病学。 通讯作者:关平原(1961-),男,教授,博士,主要研究方向为动物传染病的诊断与防控,E-mail:gpynm@yahoo.com.cn
  • 基金资助:
    内蒙古自治区自然科学基金项目(20080404MS0408)

Cloning and Sequence Analysis of gE Gene of Infectious Bovine Rhinotracheitis Virus NM06 Strain

BAI Chun-yan, GUO Ri-dong, GUANG Ping-yuan, Wurihan, Temuerbagen, MA Li-feng, Juhua(1. College of Animal Science and Veterinary Medicine, Inner Mongolia Agricultural University, Hohhot 010018, China; 2. Department of Raw Milk, Inner Mongolia Yili Co., Ltd, Hohhot 010080, China; 3. Central of Animal Disease Prevention and Control of Inner Mongolia, Hohhot 010020, China)   

  • Online:2009-10-20 Published:2009-10-20

摘要: 参考GenBank发表的牛疱疹病毒I型全基因序列设计gE基因PCR扩增引物,以牛传染性鼻气管炎病毒内蒙古分离株NM06提取的DNA为模板,运用PCR的方法扩增gE基因,扩增产物经克隆、序列测定和拼接,结果表明:测定序列全长为2086bp,包含gE基因1793bp,其中有1728bp组成的完整开放阅读框,编码576个氨基酸。将NM06株gE基因序列与GenBank发表的参考毒株核苷酸序列相比,与4株BHV-1病毒的同源性在99.3%~99.9%;与2株BHV-1.1型分离株同源性高达99.5%、99.6%;与BHV—1.2型分离株同源性为93.4%。从进化树中也可以看出:NM06株与BHV-1.1型分离株属于同一个进化分支,而BHV-1.2BH83株属于另一个进化分支,可以推测IBRV NM06分离株属于BHV—1.1型。NM06株与牛疱疹病毒5型N569病毒的同源性为82.9%,与鹿疱疹病毒2型Norway4病毒的同源性为72.6%.

Abstract: First, PCR primers were designed according to the complete sequences of bovine herpes virus type l of GenBank, then genomic DNA of the IBRV NM06 strain isolated in Inner Mongolia was extracted, and the gene was amplified by PCR. Second, PCR products were cloned and sequenced. The result showed that the length of gE gene was 1 793 bp among the sequence of 2 086 bp including the whole open reading frame of 1 728 bp, and its amino acids was 576. The result of Blast showed that gE gene of NM06 strain in homology was ranged from 99.3 % to 99.9 % compared with four strains of bovine herpes virus 1.1 (BHV-1.1), the homology of nucleotide sequences of gE gene among NM06 strain with two strains of BHV-I.1 were 99.5 % and 99.6 % respectively. In phylogenetic tree, NM06 strain and BHV-I.1 virus strain belong to the same evolutionary branch, but BHV-1.2 BH83 strain belongs to another evolutionary branch, therefore IBRV NM06 isolates was presumed as type of BHV-l.lbovine herpes virus 1.1. In addition, nucleotide sequences of gE gene of NM06 strain in homology was 82.9 % compared with bovine herpes virus type 5 N569 strain, and 72.6 % compared with Cervid herpes virus type2 Norway 4.

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